Setting up a Ubuntu system for EM image processing

From Micrographs to Particle Stack ("Preprocessing") Paticle Co

Paticle Coordinate File Formats

Defocus Determination Using Samdefocus.py

2D Classification and Particle Screening using Samclasscas.py and Samtree2d.py

FREALIGN Using Samfrealign.py

SPIDER 3D Projection Matching Using Samrefine.py

SamViewer Quick Start Guide A basic and comprehensive introduct

A basic and comprehensive introduction of SamViewer.

Random Conical Tilt reconstruction using SamViewer and SAM scripts

SamViewer picks RCT particle pairs, samrctpar.py combines RCT parameters, and samfrealign.py calculates 3D reconstructions.

Automatic particle picking using SamViewer and SAM scripts

Details of advanced usage of Samviewer, as well as a general protocol for particle picking and screening.

Preparation of Negative Stain Solution and EM Grids

Simple Steps for T12 Scope

Nanodisc Formation

Electron Microscopy for Dummies

Negative Stain EM: from Grid Preparation to Image Acquisition (JOVE)

Getting Started in Cryo-EM

MRC-LMB EM courses

em-learning.com